Figure 2 : UCSC Genome Browser track display of ENCODE and Roadmap data from specific cells and tissues.

B) UCSC genome Browser image of the CD40 gene and the 5’ region of NCOA5 on human assembly hg19 showing 20q13.12 region, RefSeq genes, Roadmap Chromatin State Segmentation by a HMM for Roadmap normal fetal lung cells, CpG islands, ChIA-PET interactions and enrichment for Pol2 in K562 cells as well as binding of Pol2 in HCT-116 cells, and open chromatin (peaks (Pk), signals (DS) and overlapping signals (OS) for DNaseI-seq and FAIRE data) in A549 lung cancer cells. The SNP rs1535045 is colored red. The rs1535045 containing region also overlaps with open chromatin in A549 cells and is enriched for POL2 binding and POL2- mediated chromatin interactions in K562 cells.

Pathak et al.Journal of Cancer Therapeutics and Research  2014 3:1DOI : 10.7243/2049-7962-3-1