Bioactive lipid profiling reveals drug target engagement of a soluble epoxide hydrolase inhibitor in a murine model of tobacco smoke exposure

The inflammatory process underlying chronic obstructive pulmonary disease (COPD) may be caused by tobacco smoke (TS) exposure. Previous studies show that epoxyeicosatrienoic acids (EETs) possess promising anti-inflammatory properties, therefore stabilization of EETs and other fatty acid epoxides through inhibition of soluble epoxide hydrolase (sEH) was investigated in mouse models of acute and subchronic inflammation caused by TS exposure. During the entire TS exposure, the potent sEH inhibitor 1-(1-methylsulfonyl-piperidin-4-yl)-3-(4-trifluoromethoxy-phenyl)-urea (TUPS) was given via drinking water. To assess drug target engagement of TUPS, a tandem mass spectrometry method was used for bioactive lipid profiling of a broad range of fatty acid metabolites, including EETs, and their corresponding diols (DHETs) derived from arachidonic acid, as well as epoxides and diols derived from other fatty acids. Several, but not all, plasma epoxide/diol ratios increased in mice treated with sEH inhibitor, compared to non-treated mice, suggesting a wider role for sEH involving more fatty acid precursors besides arachidonic acid. This study supports qualitative use of epoxide/diol ratios explored by bioactive lipid profiling to indicate drug target engagement in mouse models of TS exposure relevant to COPD, which may have ramifications for future therapeutic interventions of sEH.


Introduction
Chronic obstructive pulmonary disease (COPD), an umbrella term for a group of lung disorders characterized by poorly reversible and progressive airway obstruction, is the third leading cause of death in the United States, and a majority (80-90%) of COPDrelated deaths is those of smokers [1]. The heterogeneous and complex COPD pathology involves chronic inflammation of the respiratory tract, hypersecretion of mucus, small-airway remodeling, and emphysema [2]. Cigarette smoke-triggered inflammation is important in the pathophysiology of COPD, and involves overexpression of many proinflammatory genes [3]. Hence, transcription factors regulating expression of inflam-matory mediators may play a key role in characterizing the disease.
EETs belong to the class of regulatory lipids termed eicosanoids. Eicosanoids are derived from ARA including important inflammatory mediators such as prostaglandins and leukotrienes produced via the cyclooxygenase-(COX), and lipooxygenase-(LOX) pathways, respectively [7,15]. Similar compounds derived from other fatty acids such as linoleic acid (LA), α-linolenic acid (ALA), eicosapentaenoic acid (EPA), and docosahexaenoic acid (DHA), as well as ARA eicosanoids, are collectively known as oxylipins (Figure 1).
Previous data show that inhibition of sEH or deletion of its gene, and high levels of its substrates, EETs, are involved with endothelial signaling, angiogenesis and vascular endothelial growth factor (VEGF) secretion [17]. Maintenance of the microvasculature in the lung is critical for gas exchange, the integrity of the alveolar structure and tissue repair [18]. VEGF plays a vital role in development and maintenance of vasculature and tissue regeneration [19].
Lipid mediator profiling of the oxylipins using liquid chromatography coupled to tandem mass spectrometry (LC-MS/ MS) has proven useful in clinical and preclinical studies of airway diseases [20][21][22][23]. During tobacco smoke (TS) exposure in rats, changes in lung and BAL fluid oxylipin concentrations are accompanied with cellular infiltration to the lung [7]. We hypothesize that oxylipin profiles are shifted in mice lacking sEH and in mice treated with selective inhibitors of sEH, with potential beneficial effects on cell infiltration after TS exposure. Since LC-MS/MS analysis is capable of capturing alterations in oxylipin profiles, we used this method to study drug target engagement by focusing on the oxylipin epoxide/diol ratios demonstrating the effectiveness of sEH inhibition.

Animals
Male WT C57BL/6 mice and their counterparts K/O mice with targeted disruption in exon 1 of the sEH gene back-crossed ten generation onto a C57BL/6 genetic background at the breeding colony of University of California, Davis [24], were quarantined for one week before initialization of TS exposure. K/O mice were maintained as heterozygotes and homologous sEH + and sEH − mice were selected from the crosses. Mice were housed in a standard animal facility under controlled temperature (22 o C) and photoperiod (12 h light, 12 h dark). They were maintained on a normal rodent diet (PicoLab rodent 20, LabDiet, Richmond, IN) ad libitum. WT mice were treated with sEHI TUPS via the drinking water (10 mg/l in 10% polyethylene glycol 400) during the entire smoke exposure period. The synthesis and characterization of TUPS is described in Tsai et al [25]. Animal handling, experimentation, and sacrificing were conducted in accordance with standards established by the U.S. Animal Welfare Acts under the supervision of the University of California, Davis, Animal Care and Use Committee.

Tobacco smoke exposure
As described in Figure 2, WT(n=6) and K/O(n=4) mice were exposed to filtered air or a mixture of side stream and mainstream TS in a smoking apparatus [26] at a mean concentration of 90-130 mg total suspended particulates/ m 3 . Acute exposure (two days) was achieved with a total of 12 hours exposure during two days (90 followed by 120 mg/ m 3 for 6 hours each day). This exposure condition represents an acute response to tobacco smoke in an active smoker. While, sub-chronic exposure (one month) was achieved with exposure for 6 hours/day, 5 days/week for one month (130 mg/m 3 ) (Figure 2). These exposure conditions represent a repeated and/or adapted response in a moderate smoker over a period of time (one month). Both conditions (acute and chronic exposure) in the mouse represent that of a moderate to possibly heavy smoker in humans. The cigarettes were humidified 2R4F research cigarettes (Tobacco Health Research Institute, Lexington, KY). An automatic metered puffer was used to smoke the cigarettes under Federal Trade Commission conditions (35-ml puff, 2 s duration, 1 puff per minute). The smoke was collected in a chimney, diluted with filtered air, and delivered to whole-body exposure chambers. Necropsies were performed 18 hours following the last day of TS exposure with an overdose of sodium pentobarbital.

Blood collection
Blood was sampled by cardiac puncture and collected into EDTA-rinsed syringes from the right ventricle of each animal. Plasma for TUPS analysis and oxylipin profiling was separated In the acute model, wild-type (WT), WT treated with inhibitor (WT+sEHI) and their knock-out (K/O) counterparts were exposed to filtered air (FA) or tobacco smoke (TS) for 6 hours/day at 90 and 120 mg/m 3 . In the sub-chronic model, WT, WT+sEHI and K/O were exposed to FA or TS for 6 hours/day at 130 mg/ m 3 . Plasma and bronchoalveolar lavage (BAL) fluid concentrations of the sEH inhibitor 1-(1-methylsulfonyl-piperidin-4-yl)-3-(4-trifluoromethoxy-phenyl)-urea (TUPS) in WT mice exposed to FA or TS for two days and one month are shown in black bars (no treatment of K/O animals), and the limit of quantification are shown for non-treated WT mice (grey bars). Data are presented as mean±SE. **P<0.001 (n=6), significant differences between drug levels in non-treated WT mice and WT mice treated with TUPS. through centrifugation for 10 minutes at 400×g, and stored at -20°C until analysis.

Bronchoalveolar lavage fluid
Established protocols were followed for collection of BAL fluid [27] for the analysis of cell numbers, and oxylipin profiling. Briefly, the trachea was cannulated, and the right lung lobes were sequentially lavaged with Ca 2 + /Mg 2 + -free phosphatebuffered saline (PBS, pH 7.4) or Hank's Balanced Salt Solution (Invitrogen, Carlsbad, CA) in four aliquots. The volume of each aliquot was equal to 35 ml/kg body weight (approximately 90% of total lung capacity). Each aliquot was instilled into the lungs three times before final collection. The BAL fluid was immediately centrifuged at 250×g for 10 min at 4°C to pellet cells. The cell pellet was then resuspended in PBS (Fisher Scientific, Pittsburgh, PA), and the cells were counted with a hemocytometer.

TUPS extraction and analysis
The potent sEHI TUPS was analyzed in plasma according to established protocols [25]. Briefly, samples were liquid-liquid extracted with 200 µl ethyl acetate [28], and the collected organic phase was dried and re-dissolved in a methanol solution. Quantitation of TUPS was achieved by LC-MS/MS analysis.

Bioactive lipid profiling
The bioactive lipid profiling of oxylipins in BAL fluid and plasma was done in accordance with previously described protocols [29]. Briefly, oxylipins were isolated by solid phase extraction (Waters Oasis HLB cartridges, Waters Corporation, Milford, MA), re-dissolved in methanol standard solution and quantified using LC-MS/MS analysis. Standard curves for each measured oxylipin were used in calculating the individual oxylipin concentrations.

PCR analysis
Total mRNA was isolated from middle lobes by using Invitrogen PureLink RNA mini kit (Invitrogen, Carlsbad, CA). Total mRNA was converted to cDNA by the High-Capacity cDNA Reverse Transcription kit (Applied Biosystems, Foster City, CA). qRT-PCR was performed with the Fast SYBR Green Master Mix (Applied Biosystems, Foster City, CA). Samples were run in triplicate with an Applied Biosystems 7500 Fast instrument (Foster City, CA). The primer sequences for each gene are listed in Supplementary Table S5. The relative quantification of mRNA transcripts was carried out by the delta C T method. The amount of target normalized to an endogenous reference (beta actin) were presented as fold increase to its control (WT sham). The ΔΔC T was then used to calculate the approximate fold difference, 2 ΔΔCT .

Statistical analysis
All data were calculated as mean±SEM. Univariate comparisons between experimental groups were made by Student's t-test. A P-value of 0.05 or less was considered significant if nothing else is stated. Multivariate analysis using SIMCA V.13 (Umetrics, Umeå, Sweden) evaluated relationships among experimental groups with regard to epoxide/diol ratios by principal component analysis (PCA) [30]. Prior to PCA, epoxide/ diol ratios were log transformed, scaled to unit variance, and mean-centered. Two principal components were calculated. Effects of TS exposure, sEHI, and sEH K/O strain for PCR analysis were assessed by multi-factor analysis of variance (ANOVA). Differences among experimental groups were examined by using one-way ANOVA followed by Bonferroni post hoc test.

TUPS plasma and BAL fluid concentrations
As expected, concentrations of the sEHI TUPS in plasma (Figure 2) were significantly elevated in all treated mice. Lower concentrations of TUPS (1.5 ng/ml, corresponding to the quantification limit) were measured in WT alone (Figure 2). The higher TUPS levels in plasma at one month compared to two days exposure samples indicate slight accumulation of drug with time but that it quickly reaches a steady state (Figures 2A and 2B). No significant levels of TUPS were measured in BAL fluid at two day exposure (data not shown), only one month later around 50 ng/ml TUPS was measured in BAL fluid ( Figure 2B).

Oxylipin BAL fluid and plasma concentrations
Measured oxylipins and their abbreviations are found in Figure 1.

Total concentrations of oxylipins in BAL fluid (Supplementary
Tables S1 and S2) were significantly lower than in plasma (Supplementary Table S3 and S4). In BAL fluid, sub-chronic exposure to TS induced a reduction in total oxylipin levels in the WT mice, but not WT treated with sEHI or K/O mice (Supplementary Table S2). While total epoxide levels, as well as epoxide fractions, were higher in BAL fluid of sham exposed to TUPS treated and K/O mice, compared to WT mice. After acute TS exposure, elevated epoxide of arachidonic acid (12(13)-EpOME) were observed in mice treated with sEHI and K/O (Supplementary Tables S1). Interestingly, oxylipins derived from the LOX-pathway dominated the profiles (Figure 3). In general, LOX-, COX-and CYP-dependent oxylipin concentrations differed between BAL fluid and plasma with lower COXfractions and higher CYP-fractions in plasma air exposure. Plasma oxylipin concentrations show a remarkable increase in epoxide levels in TUPS treated mice and K/O mice compared to WT mice, independent of exposure (Supplementary Table S3 and S4). In Figure 3, fractions of the three major fatty acid catabolic pathways are shown in BAL fluid and plasma from acute and sub-chronic TS and sham exposed mice. In general, sub-chronic TS exposure caused a shift in BAL fluid oxylipin composition in comparison to acute TS exposure, with a more prominent dominance of LOX-derived metabolites after a prolonged exposure time, while plasma oxylipin composition showed a more stable pattern over time (Figure 3). Acute and sub-doi: 10.7243/2059-0008-1-1 Figure 3. Oxylipin fractions in bronchoalveolar lavage (BAL) fluid and plasma derived from cyclooxygenase (COX, light grey), lipoxygenase (LOX, dark grey), and cytochrome P450 (CYP, black) enzymatic pathways in mice exposed to tobacco smoke or filtered air for two days (left panel) or one month (right panel). chronic sham exposure show similar oxylipin compositions in BAL fluid with LOX-derived metabolites dominating, followed by COX-and CYP-derived metabolites (Figure 3). While in plasma, the LOX-derived metabolites are dominating followed by metabolites from the CYP pathway and to a lesser extent from the COX pathway (Figure 3).

Effects of the sEHI TUPS on TS exposure-induced cell infiltration
After two days of TS exposure, the number of infiltrated cells in BAL fluid was significantly increased as compared to filtered air exposed mice (137,761±27,947 vs. 34,935±5,967 total BAL fluid cells, respectively). Accordingly, a 3-fold change was persisted after one month of TS exposure (from 12,596±3,601 to 40,020±18,036 BAL fluid cells after TS exposure). Both K/O mice and TUPS treated mice evidenced a significant lower degree of cell infiltration as compared to TS exposed WT mice after two days of TS, 3-fold and 2-fold lower in K/O mice or WT treated with sEHI, respectively (49,539±10,026 and 79,922±17,239 BAL fluid cells, respectively). Same fold decrease persisted after one month TS exposure of K/O mice and WT mice after TUPS treatment (14,987±3,765 and 26,859±8,137 total BAL fluid cells, respectively). Cell differentials evidenced a significant elevation of neutrophils after one month of TS exposure, an elevation which was reduced to a significant extent (4-

Effects of TUPS on TS exposure-induced BAL fluid epoxide to diol ratios
BAL fluid LOX-, COX-and CYP-dependent oxylipin concentrations are found in Supplementary Tables S1 and S2. Among the epoxides, only 12(13)-EpOME concentrations in both TUPS and K/O mice were elevated in both filtered air and TS exposure experiments (Supplementary Table S1). Analyzing the ratios of epoxide to diols, after two days of TS exposure, a significant increase in 9,10-EpOME to diol ratio was detected in the BAL fluid from WT mice (Figure 4A). Inhibition of sEH both pharmacologically and genetically showed no advantage on epoxide to diol ratio in BAL fluids. Interestingly, 9(10)-EpOME to 9,10-DiHOME ratios showed a significant decrease after one month exposure to TS only in WT mice. No change in this ratio was seen in TUPS treated or K/O mice ( Figure 4B). Furthermore, no significant changes in the 12(13)-EpOME to 12,13-DiHOME ratio were seen before or after TS exposure ( Figure 4C). Overall, results for epoxide to diol ratios in BAL fluid were inconsistent.

Effects of TUPS on TS exposure-induced plasma epoxide to diol ratios
The bioactive lipid profiling of plasma covered a broad range of epoxides and diols derived from LA (Figure 5), ARA (Figure 6), ALA and EPA (Figure 7) and DHA (Figure 8). As expected, the LA epoxide to diol ratios were in general significantly elevated after treatment with sEHI, as well as in K/O mice compared to WT mice, both exposed to TS and filtered air (Figure 5). TS exposure induced a significant increase in the 9(10)-EpOME/ DiHOME ratio after two days of exposure ( Figure 5A), but not after one month exposure ( Figure 5C). However, K/O mice demonstrated a decrease in this ratio after one month of exposure, but not after two days. This was also true for the 12(13)-EpOME/DiHOME ratio in K/O mice exposed to tobacco smoke for two days (Figures 5B and 5D). The inconsistency in the epoxide to diol ratios after one month of TS exposure is a result of a massive release of diols in the plasma that drives this value (Supplementary Table S4).
Analysis of ARA epoxide to diol ratios is shown in Figure 6. There was a higher degree of significant changes after two days of exposure (Figures 6A-6D) than after one month of exposure (Figures 6E-6H). The general trend after two days of exposure was increased epoxide to diol ratios in all of the four ARA-epoxides/diols after treatment compared to nontreated mice, an increase that was further induced in K/O mice. In mice exposed for one month, the only significant increase was found in the K/O 8(9)-EET/DHET and K/O 14(15)-EET/DHET ratios (Figures 6F and 6H).
The ALA epoxide to diol ratio was only detected after two days of exposure ( Figure 7A). In accordance with the two days

white bars) or tobacco smoke (grey bars) for two days (A) and one month (B and C).
Data are presented as mean±SE. *P<0.05, treated air exposed group significantly different from the filtered air exposed control group. ‡P<0.05, significant differences between tobacco smoke vs filtered air exposure within the WT mice. BAL fluid 9,10-EpoME:DIHOME ratio after 1 mo exposure BAL fluid 9,10-EpoME:DIHOME ratio after 2 days exposure A B C ARA epoxide to diol ratios, it was increased after treatment, and further increased in K/O mice ( Figure 7A). The EPA epoxides and diols were only analyzed in mice exposed for one month ( Figure 7B). The 17(18)-EpETE/DiHETE ratio was significantly elevated both after treatment and in K/O mice. The DHA epoxides and diols were also only analyzed in mice exposed for one month (Figure 8). Three of the ratios (10(11)-EpDPE/ DiHDPE, 13(14)-EpDPE/DiHDPE, and 16(17)-EpDPE/DiHDPE) were significantly decreased in WT mice exposed to TS compared to filtered air. Two of the ratios were significantly decreased after treatment (Figures 8A and 8B), while one was significantly increased (Figure 8D). Furthermore, all four DHA epoxide to diol ratios were significantly increased in K/O vs. WT mice exposed to TS (Figure 8).  18 0.0 9,10-EpOME:DIHOME ratio after 2 days exposure 12,13-EpOME:DIHOME ratio after 2 days exposure 12,13-EpOME:DIHOME ratio after 1 mo exposure 9,10-EpOME:DIHOME ratio after 1 mo exposure B D C A

Figure 5. LA derived plasma epoxide to diol ratios after exposure to filtered air (white bars) or tobacco smoke (grey bars) for two days (A and B) and one month (C and D).
Data are presented as mean±SE. *P<0.05, treated and K/O filtered air exposed groups significantly different from the filtered air exposed control group. †P<0.05 treated and K/O tobacco smoke exposed groups significantly different from the tobacco smoke exposed control group. ‡P<0.05, significant differences between tobacco smoke and filtered air exposure within the treated mice and K/O mice, respectively.
A summary of plasma LOX-, COX-and CYP-dependent oxylipin concentrations are found in Supplementary Table S3 and S4. Overall, plasma concentrations of epoxides from regioisoforms of LA, ARA, or ALA showed a significant increase in both TUPS-treated and K/O mice (Supplementary Table S3). These higher concentrations of epoxides are maintained after one month exposure to TS (Supplementary Table S4).

Multivariate analysis of epoxide to diol ratios
In order to comprehend the relation between the epoxide/ diol ratios in the different exposure and treatment groups, PCA was used. Two models with two principal components each was calculated, one for the acute exposure (R 2 X=0.909, Q 2 =0.722) and one for the sub-chronic exposure (R 2 X=0.859, Q 2 =0.569). Only ratios measured in all samples were included in the model. The score plot (Figure 9) revealed the largest variation in the first component (horizontal axis) among samples from WT mice (to the left) and K/O mice (to the right). The mice treated with the potent sEHI TUPS were clustering closer to the K/O animals in the acute model driven mainly by principle component one (Figure 9A), compared to the sub-chronic model (Figure 9B). The epoxide/diol ratios mainly responsible for the separation along the first component in both models were 14(15)-EET/DHET and 12(13)-EpOME/ DiHOME, suggesting that these epoxides and diols are the best markers for drug target engagement, independent of exposure regiment.

Effects of TUPS on TS exposure-induced gene expression levels of VEGFα and TNFα in lung homogenate
Levels of mRNA expression of pro-inflammatory gene products TNFα and VEGFα were measured in whole middle lung homogenates. Upon TS exposure, no differences in the mRNA expression of TNFα were detected in WT mice ( Figure 10A). Interestingly, in both TUPS-treated WT mice and K/O mice, TNFa mRNA expression was significantly decreased in both exposure regiments (Figure 10A). These data may suggest that while sub-chronic TS exposure is not sufficient to in-

grey bars) for two days (A-D) and one month (E-H).
Data are presented as mean±SE. *P<0.05, treated and K/O filtered air exposed groups significantly different from the filtered air exposed control group. †P<0.05 treated and K/O tobacco smoke exposed groups significantly different from the tobacco smoke exposed control group. ‡P<0.05, significant differences between tobacco smoke and filtered air exposure within the K/O mice. 17(18)-EpETE was not detected in WT mice exposed to filtered air. *P<0.05, treated and K/O filtered air exposed groups significantly different from the filtered air exposed control group. †P<0.05 treated and K/O tobacco smoke exposed groups significantly different from the tobacco smoke exposed control group. ‡P<0.05, significant differences between tobacco smoke and filtered air exposure within the K/O mice.
duce pro-inflammatory gene expression changes in whole lung homogenates, the basal mRNA expression levels of this mediator is decreased when either sEH is inhibited or deleted ( Figure 10A). No change in VEGF mRNA expression was found in lung homogenates after sub-chronic TS exposure in WT mice, but a significant increase in VEGF mRNA expression was detected in TUPS-treated mice followed by TS exposure (Figure 10B). This pattern was also evident in K/O mice, although basal expression of VEGF was high in sham exposed mice (Figure 10B). This observation may indicate why we observed lower number of infiltrated cells in BAL fluid of both TUPS treated and K/O mice.

Discussion
In accordance with reported protective properties of EETs in inflammation, a high EET/DHET ratio is thought to be desirable, which was induced for some treatment groups, but not for all. Other epoxide/diol ratios were also affected, suggesting a wider role for sEH involving more fatty acid precursors besides ARA. TS exposure-induced decrease in plasma epoxide/diol ratios from WT mice was evident to a significant extent in three of the measured ratios, and they were all derived from DHA. In K/O mice, TS exposure-induced decrease in plasma epoxide/diol was evident to a significant extent in four of the measured ratios, two derived from LA, one from ARA, and one from ALA. This suggests that TS exposure has a negative effect, at least in part, on epoxide/diol ratios, which can be restored by sEH-intervention, either by pharmacological inhibition or through gene disruption. The anti-inflammatory effect of sEH inhibition in another model was demonstrated in the study of Smith et al, in which sEH inhibiton was found to attenuate the inflammation caused by acute TS exposure in spontaneously hypertensive rats [7]. EETs play a central role in the inflammatory process. For example, elevated levels of EETs due to sEH inhibition prevented the expression of adhesion molecules including E-selectin, vascular cell adhesion molecule 1, and intercellular adhesion molecule 1, which facilitate leukocyte adhesion to the vascular wall to promote inflammation [31]. In order to further elucidate the role of sEH in TS exposureinduced inflammation, mechanistic studies highlighting how sEH inhibition regulates inflammation are needed.
The effectiveness of the sEHI TUPS in reducing pulmonary inflammation from tobacco smoke is shown by the dramatic reduction in cell numbers detected in BAL fluid, particularly in the acute model of inflammation. Furthermore, the decrease in neutrophil numbers in the sub-chronic model, both in K/O animals and after TUPS treatment, support attenuation of TS-induced neutrophil influx by TUPS. The higher expression of VEGF along with a reduction of the pro-inflammatory mediator, TNFα, expression in whole middle lung extract, can be explained by the lower number of infiltrated BAL fluid cells. VEGF and its receptor mediate survival signaling that is critical in endothelial cell survival [32] and wound healing. Previous studies have shown that emphysema patients have decreased VEGF expression along with increased endothelial cell death [33]. Furthermore, it has been shown that tobaccosmoke exposure significantly decreases VEGF levels and its downstream signaling in mouse and rat lungs [34,35]. Here, we show that sub-chronic smoke exposure alone was not sufficient to induce changes in VEGF expression, but the basal levels of VEGF may indicate higher survival rate of endothelial cells and healthy vasculature.
The ratio of lipid epoxides to their corresponding diols is commonly used as qualitative indicator of target engagement for sEHI since one expects the substrate epoxides to increase and the corresponding diol products to decrease when the sEH is inhibited. The high abundance of oxylipins in the blood from the 18:2 lipid linoleate is particularly attractive as an indicator of target engagement due to their ease of analysis as recently shown in a study on cardiac function [36]. In general, this study supports the qualitative use of epoxide to diol ratios to indicate target engagement. This trend is most . DHA derived plasma epoxide to diol ratio after exposure to filtered air (white bars) or tobacco smoke (grey bars) for one month. *P<0.05, treated and K/O filtered air exposed groups significantly different from the filtered air exposed control group. †P<0.05 treated and K/O tobacco smoke exposed groups significantly different from the tobacco smoke exposed control group. ‡P<0.05, significant differences between tobacco smoke and filtered air exposure within the WT and K/O mice, respectively. clearly seen with genetic K/O animals with high ratios. Our data suggest that even the high levels of TUPS observed in the plasma, which are far greater than the in vitro half-maximal inhibitory levels (TUPS IC 50 on recombinant murine sEH=9 nM) [37], were not sufficient to completely inhibit the sEH. This could be due to some enzyme present in tissues which is poorly reached by the TUPS. Furthermore, low levels of EETs in BAL fluids are detectable using expensive, laborious and highly sensitive LC-MS/MS methods. We believe that the ratio of fatty acid epoxides/diols provides a much better reflection of these metabolites in a temporal and spatial manner. It is however, captured temporal changes that might be followed by cellular changes. In this regards, unlike chronic TS exposure, it could be that in acute model, the lungs are still healthy and trying to 'fight' against TS exposure by an increase in fatty acid metabolites.
Numerous factors contribute to the qualitative nature of the lipid epoxide/diol ratio as an indicator of drug target engagement of sEHI. First, epoxide levels are regulated by release of epoxide containing lipids from more stable pools, release of lipid substrate, and rate of biosynthesis, all of which can vary. For example, some inhibitors of phosphodiesterase can alter the ratio of lipid epoxides and diols dramatically [38].
Secondly, the diols are rapidly conjugated with glucuronic acid and removed by filtration and active transport [39]. Thirdly, there is a massive difference in polarity between the lipid epoxide and their diols placing them in largely different in vivo pools. Finally, both epoxides and diols are subject to many other reactions common to fatty acids including chain elongations and beta oxidation, P450 oxidation and peroxidation, reincorporation into phospholipids and other pathways. Thus, it is not surprising that the epoxide to diol ratios often has more qualitative than quantitative value.

Conclusions
Our study demonstrates a novel, potent and selective soluble epoxide hydrolase inhibitor that has good aqueous solubility with high oral bioavailability in mice. As a result of this inhibition, a shift in substrate to product ratio is observed. Furthermore, in this in vivo study, we show that inhibition of soluble epoxide hydrolase results in down regulation of an inflammatory response induced by acute or chronic tobacco smoke exposure as was observed from total cell, neutrophils and macrophage lung cell infiltration. This observation was, for the first time, supported by genetically modified mice that lack the Ephx2 gene. Furthermore, here we demonstrate    . mRNA levels of pro-inflammatory mediator TNFα and growth factors VEGF in lung extracts. Mice were exposed to tobacco smoke or filtered air for one month. At the end of the study, whole middle lung was extracted and mRNA was measured in triplicate as described under Materials and Methods. Data are presented as mean±SEM. Statistical analysis was performed using ANOVA followed by Bonferroni post hoc analysis. *P<0.05; **P<0.001 significant differences compared to WT in each group. a comprehensive profile analysis of omega-3 and 6 fatty acid metabolites in regard to tobacco smoke exposure, lung inflammation and soluble epoxide hydrolase inhibition. In accordance to recent studies published by Yang et al., [40], showing that sEH inhibition attenuates inflammation and airway hyperresponsiveness in mice [40] and Podolin et al., [41], showing that inhibition of EETs to DHETs conversion also result in down-regulation of the inflammatory response induced by repetitive exposure to cigarette smoke. While the mechanism of action is not reported, supporting evidences from previous studies show that the anti-inflammatory effects of sEHI are believed to occur primarily as a result of the attenuation of the metabolism of EETs to DHETs [41].
We clearly see this trend here in this study. The decrease in TNF-α gene expression in lung homogenates reported here also shed some light on the mechanism of action by which sEHI works. EETs have been reported to inhibit the NF-κB signaling pathway, and the subsequent expression of the adhesion molecules, vascular cell adhesion molecule-1 (VCAM-1), intercellular adhesion molecule-1 (ICAM-1), and E-selectin, thereby attenuating leukocyte migration [10]. Similarly, decreases in BAL fluid leukocyte numbers have been reported in the spontaneously hypertensive rat following repetitive smoke exposure concomitant with sEHI treatment [7,8]. Such a mechanism would be consistent with the reduction in BAL fluid leukocytes exhibited by cigarette smoke-exposed mice treated concomitantly with sEHI [41]. Interestingly, these inhibitors are currently under human study for the evaluation of safety, tolerability, pharmacokinetics (PK) and pharmacodynamics (PD) administered to healthy adult male moderately obese smokers [42]. Finally, our findings demonstrate the ability of sEH to function as a potential pharmaceutical target for the development of therapies preventing or treating COPD.