Table 1 : Repetitive elements in the genomic sequence of SCYA-115.


score diverged
bp (%)
deleted
bp (%)
inserted
bp (%)
begin end repeat Class/family

213 3.9 0.0 0.0 144 183 (CA)n Simple_repeat
318 16.0 1.0 0.0 1766 1865 L1-55_XT LINE/L1
593 19.4 0.5 0.0 1782 2003 IMPB_01 Satellite
29 48.3 0.0 0.0 2030 2058 AT_rich Low_complexity
486 0.0 0.0 0.0 2201 2258 (TG)n Simple_repeat
22 62.1 0.0 0.0 2273 2301 AT_rich Low_complexity
283 24.2 0.8 0.7 3346 3450 Tc1-4Ory DNA/TcMar-Tc1

The scores were derived from RepeatMasker.

He et al.  2013 2:3DOI : 10.7243/2050-0874-2-3